Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10597.1Putative hybrid sensor and regulator. (820 aa)    
Predicted Functional Partners:
AKU12240.1
Complex sensory protein.
  
 
 0.985
AKU12182.1
Hypothetical protein.
 
 0.972
AKU13052.1
Chemotaxis protein CheV-like.
 
 
 0.952
AKU11788.1
Histidine kinase.
 
 
0.951
AKU13053.1
Chemotaxis protein CheV-like.
 
 
 0.951
AKU11477.1
Sensory transduction histidine kinase.
 
 
0.950
AKU12489.1
Response regulator receiver.
 
 
 0.950
AKU13615.1
Hypothetical protein.
  
 
 0.948
AKU10518.1
PAS/PAC sensor hybrid histidine kinase.
 
 
0.947
AKU11211.1
Hypothetical protein.
 
 
0.946
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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