STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10608.1Ferredoxin V protein. (115 aa)    
Predicted Functional Partners:
AKU12873.1
Hydrogen dehydrogenase, alpha subunit.
  
 0.956
AKU14480.1
Formate dehydrogenase, NAD(P) reducing, beta subunit.
  
 0.956
AKU10591.1
Putative NifQ protein.
 
 0.903
AKU10609.1
Nitrogenase molybdenum-iron protein subunit beta; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.890
AKU11159.1
2-ketoglutarate NADP oxidoreductase, gamma subunit.
  
 0.880
AKU10610.1
Nitrogenase molybdenum-iron protein subunit alpha.
 
  
 0.879
bzdV
BzdV.
   
 0.862
AKU10592.1
Nif-specific ferredoxin III protein.
 
 0.831
AKU12888.1
NADH dehydrogenase subunit B.
  
 0.791
nuoD
NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
  
 0.787
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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