Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10643.1Hypothetical protein. (457 aa)    
Predicted Functional Partners:
AKU11863.1
Hypothetical protein.
  
     0.774
AKU10056.1
Type I secretion membrane fusion protein, HlyD family.
 
  
 0.755
AKU10057.1
Type I secretion system ATPase.
 
 
 0.713
AKU14089.1
Putative transmembrane sensor protein.
 
 0.652
AKU10384.1
Hypothetical protein.
  
     0.642
AKU10058.1
Hypothetical protein.
 
 
0.641
AKU10276.1
Hypothetical protein.
 
 0.587
AKU14170.1
Hypothetical protein.
 
  
 0.582
AKU11186.1
Hypothetical protein.
  
   
 0.559
AKU11097.1
Calcium binding hemolysin protein, putative.
 
0.553
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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