close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dadA-2D-amino acid dehydrogenase small subunit; Oxidative deamination of D-amino acids. (447 aa)    
Predicted Functional Partners:
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
 
 0.916
AKU12025.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.914
dadA
FAD dependent oxidoreductase family protein; Oxidative deamination of D-amino acids.
  
  
 
0.907
AKU10015.1
Aminotransferase class-IV.
    
 0.906
hisC-2
Histidinol-phosphate aminotransferase; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.904
AKU10676.1
Aromatic amino acid aminotransferase.
     
 0.903
AKU12707.1
Aromatic amino acid aminotransferase.
     
 0.903
AKU12026.1
Sarcosine oxidase delta subunit family protein.
  
 
 0.668
AKU11422.1
NADH:flavin oxidoreductase.
  
 0.647
AKU13189.1
Glycerol-3-phosphate dehydrogenase.
 
  
 0.632
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.