Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10694.1Alginate biosynthesis regulatory protein. (254 aa)    
Predicted Functional Partners:
AKU13005.1
Two-component system sensor protein.
 
 
 0.991
AKU13776.1
Type IV pilus response regulator.
  
   
 0.693
AKU10692.1
Putative serine/threonine protein kinase.
 
  
 0.686
AKU13780.1
Pili chemotaxis protein similar.
 
   
 0.637
AKU13778.1
Twitching motility protein.
  
   
 0.587
AKU13779.1
Twitching motility transmembrane protein.
  
     0.580
argH
Argininosuccinate lyase.
     
 0.573
AKU13777.1
Type IV pilus response regulator.
  
   
 0.541
AKU12240.1
Complex sensory protein.
  
  
 0.540
AKU13642.1
FHA domain-containing protein.
 
     0.511
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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