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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10694.1Alginate biosynthesis regulatory protein. (254 aa)    
Predicted Functional Partners:
AKU13005.1
Two-component system sensor protein.
 
 
 0.994
AKU10692.1
Putative serine/threonine protein kinase.
 
  
 0.696
AKU13776.1
Type IV pilus response regulator.
  
   
 0.693
AKU13780.1
Pili chemotaxis protein similar.
 
   
 0.633
AKU13778.1
Twitching motility protein.
  
   
 0.597
AKU13779.1
Twitching motility transmembrane protein.
  
     0.580
argH
Argininosuccinate lyase.
     
 0.574
AKU12240.1
Complex sensory protein.
  
  
 0.541
AKU13777.1
Type IV pilus response regulator.
  
   
 0.540
AKU13642.1
FHA domain-containing protein.
 
     0.510
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.