Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10715.1Transcriptional regulator, Nnr-like. (225 aa)    
Predicted Functional Partners:
AKU10716.1
Exodeoxyribonuclease III.
     
 0.801
AKU10714.1
Hypothetical protein.
 
     0.708
AKU11264.1
Hypothetical protein.
    
 0.510
AKU10133.1
Transcriptional regulator Dnr-type.
  
     0.496
AKU11770.1
Hypothetical protein.
  
 0.490
AKU14170.1
Hypothetical protein.
  
 0.490
pqqB
Pyrroloquinoline quinone biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.
    
  0.480
AKU10717.1
Hypothetical protein.
       0.463
AKU10404.1
Lipopolysaccharide kinase (Kdo/WaaP) family.
   
 0.454
AKU10409.1
Lipopolysaccharide core biosynthesis protein.
   
 0.454
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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