Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10721.1Hypothetical protein. (310 aa)    
Predicted Functional Partners:
AKU10723.1
Putative exopolysaccharide biosynthesis protein.
 
    0.930
AKU10722.1
Putative polysaccharide export protein.
 
   
 0.925
AKU10724.1
Putative polysaccharide export protein.
 
     0.903
AKU10719.1
Hypothetical protein.
 
     0.846
AKU11739.1
Hypothetical protein.
 
 
   0.800
AKU11741.1
Chain length determinant protein EpsF.
 
    0.782
AKU11746.1
Hypothetical protein.
 
     0.782
AKU10726.1
Hypothetical protein.
 
     0.761
AKU11742.1
Polysaccharide export protein EpsE.
 
   
 0.754
AKU10727.1
Hypothetical protein.
 
   
 0.751
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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