Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10748.1Hypothetical protein. (621 aa)    
Predicted Functional Partners:
AKU12489.1
Response regulator receiver.
 
 
 0.969
AKU12597.1
Putative signaling protein.
 
 
0.942
AKU13052.1
Chemotaxis protein CheV-like.
  
 0.927
AKU13053.1
Chemotaxis protein CheV-like.
  
 0.927
AKU12244.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
 
0.925
AKU12236.1
CheA signal transduction histidine kinase.
  
 0.910
AKU09925.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
 
0.897
AKU12240.1
Complex sensory protein.
 
 
0.885
AKU11478.1
Response regulator.
 
 
 0.879
AKU10031.1
PAS domain S-box.
 
 
 0.861
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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