Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10764.1Hypothetical protein. (576 aa)    
Predicted Functional Partners:
AKU12489.1
Response regulator receiver.
 
 0.984
AKU10672.1
Diguanylate cyclase/phosphodiesterase.
 
 
 0.933
AKU10031.1
PAS domain S-box.
 
 
 0.930
AKU12063.1
Two-component system sensor-response regulator hybrid protein.
 
 
 0.930
AKU12244.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
 
0.930
AKU11478.1
Response regulator.
 
 
 0.929
AKU11211.1
Hypothetical protein.
 
 
 0.927
AKU11477.1
Sensory transduction histidine kinase.
 
 
 0.926
AKU10597.1
Putative hybrid sensor and regulator.
 
 
 0.925
AKU12597.1
Putative signaling protein.
 
 
0.923
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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