Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10786.1Hypothetical protein. (150 aa)    
Predicted Functional Partners:
AKU10785.1
Carboxy-terminal processing protease; Belongs to the peptidase S41A family.
       0.723
AKU12932.1
Hypothetical protein.
  
     0.706
AKU10342.1
Hypothetical protein.
  
     0.686
AKU10787.1
Adenylyltransferase.
       0.671
AKU13426.1
Hypothetical protein.
  
     0.669
AKU12686.1
Positive regulator of sigma(E), RseC/MucC.
  
     0.661
AKU10784.1
M23 family peptidase.
 
     0.652
AKU10298.1
Hypothetical protein.
  
     0.627
AKU10815.1
Hypothetical protein.
  
     0.605
AKU13837.1
Hypothetical protein.
  
     0.579
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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