Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10815.1Hypothetical protein. (309 aa)    
Predicted Functional Partners:
AKU11336.1
Transposase IS4 family protein.
  
     0.655
AKU11335.1
Transposase, IS4 family.
  
     0.646
AKU14264.1
N6-adenine-specific DNA methyltransferase, N12 class.
  
     0.646
AKU10391.1
Putative transmembrane protein.
  
     0.609
AKU10786.1
Hypothetical protein.
  
     0.605
AKU10814.1
Hypothetical protein.
       0.605
AKU10390.1
Putative transmembrane protein.
  
     0.590
AKU13470.1
Lipoprotein, NlpB/DapX family.
  
     0.526
AKU14188.1
Hypothetical protein.
  
     0.522
AKU10833.1
Hypothetical protein.
  
     0.472
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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