Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10819.1Hypothetical protein. (1286 aa)    
Predicted Functional Partners:
AKU10820.1
Nitrilase/cyanide hydratase/apolipoprotein N-acyltransferase.
 
     0.854
AKU10821.1
Zn-dependent peptidase, potential modulator of DNA gyrase.
 
   
 0.728
AKU10320.1
Cell division protein.
  
     0.698
AKU13450.1
Hypothetical protein.
 
     0.676
AKU10298.1
Hypothetical protein.
  
     0.672
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.
  
     0.662
AKU10698.1
uroporphyrin-III C-methyltransferase.
  
     0.653
AKU10010.1
Rod shape-determining MreD transmembrane protein.
 
     0.650
cobD
Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
  
     0.636
AKU12925.1
Hypothetical protein.
  
     0.634
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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