Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU10825.1Sensory transduction histidine kinase. (467 aa)    
Predicted Functional Partners:
AKU10823.1
Two-component transcriptional regulator.
 
 
 0.992
AKU14154.1
RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
     
 0.913
AKU10824.1
Hypothetical protein.
     
 0.818
AKU13777.1
Type IV pilus response regulator.
 
 
 0.702
AKU14603.1
Two-component system, OmpR family, response regulator.
 
 
 0.654
AKU12598.1
Polar differentiation response regulator.
 
   
 0.630
AKU13667.1
Hypothetical protein.
 
 
 0.615
AKU10228.1
Functional role page for TorCAD operon transcriptional regulatory protein TorR.
 
 
 0.614
AKU11211.1
Hypothetical protein.
 
 
0.613
AKU10680.1
Two-component system, OmpR family, response regulator.
 
 
 0.602
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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