Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU10846.1Radical SAM family protein. (472 aa)    
Predicted Functional Partners:
AKU10845.1
Hypothetical protein.
       0.773
AKU13837.1
Hypothetical protein.
  
     0.692
AKU13492.1
Denitrification system component cytochrome C-552.
  
     0.548
AKU10955.1
Cache sensor protein.
  
     0.536
AKU10844.1
Hypothetical protein.
 
     0.529
AKU12731.1
NADH-dependent phenylglyoxylate dehydrogenase subunit beta.
  
    0.502
AKU12344.1
Hypothetical protein.
  
     0.483
AKU11697.1
Phenylglyoxylate:acceptor oxidoreductase.
  
    0.470
AKU11700.1
Pyruvate/2-ketoisovalerate 2-oxoacid:acceptor oxidoreductase subunit delta.
  
     0.444
AKU12734.1
Phenylglyoxylate acceptor oxidoreductase.
  
     0.427
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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