Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ycgRHypothetical protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility. (256 aa)    
Predicted Functional Partners:
AKU10847.1
Putative chaperon of flagellar synthesis.
 
  
 0.943
AKU10882.1
Flagellar protein FliS.
  
  
 0.927
AKU10880.1
Hypothetical protein.
 
  
 0.926
AKU10883.1
Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.913
AKU12153.1
MCP methyltransferase/methylesterase, CheR/CheB.
  
  
 0.874
AKU12184.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
  
  
 0.874
AKU10879.1
Flagellar related protein.
 
  
 0.849
AKU10848.1
Putative negative regulator of flagellin synthesis.
 
  
 0.842
AKU13053.1
Chemotaxis protein CheV-like.
 
  
 0.837
AKU13052.1
Chemotaxis protein CheV-like.
 
  
 0.807
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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