AKU10882.1 protein (Azoarcus sp. CIB) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AKU10882.1

Flagellar protein FliS. (136 aa)

Predicted Functional Partners:

AKU10860.1

0.996

AKU10883.1

0.996

AKU10885.1

0.996

flgK

0.990

AKU10871.1

0.982

AKU10881.1

0.982

AKU10848.1

0.980

AKU10851.1

0.975

AKU10874.1

0.975

AKU10866.1

0.974

Your Current Organism:

Azoarcus sp. CIB

NCBI taxonomy Id: 198107
Other names: A. sp. CIB

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKU10848.1	AKU10851.1	AzCIB_0943	AzCIB_0946	Putative negative regulator of flagellin synthesis.	Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.	0.925
AKU10848.1	AKU10860.1	AzCIB_0943	AzCIB_0955	Putative negative regulator of flagellin synthesis.	Flagellar hook-filament junction protein 3.	0.894
AKU10848.1	AKU10866.1	AzCIB_0943	AzCIB_0961	Putative negative regulator of flagellin synthesis.	Flagellar motor switch protein.	0.775
AKU10848.1	AKU10871.1	AzCIB_0943	AzCIB_0966	Putative negative regulator of flagellin synthesis.	Flagellar-specific ATP synthase.	0.512
AKU10848.1	AKU10874.1	AzCIB_0943	AzCIB_0969	Putative negative regulator of flagellin synthesis.	Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.	0.793
AKU10848.1	AKU10881.1	AzCIB_0943	AzCIB_0976	Putative negative regulator of flagellin synthesis.	Flagellar-like protein.	0.720
AKU10848.1	AKU10882.1	AzCIB_0943	AzCIB_0977	Putative negative regulator of flagellin synthesis.	Flagellar protein FliS.	0.980
AKU10848.1	AKU10883.1	AzCIB_0943	AzCIB_0978	Putative negative regulator of flagellin synthesis.	Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	0.925
AKU10848.1	AKU10885.1	AzCIB_0943	AzCIB_0980	Putative negative regulator of flagellin synthesis.	Flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.889
AKU10848.1	flgK	AzCIB_0943	AzCIB_0954	Putative negative regulator of flagellin synthesis.	Flagellar hook-filament junction protein 1.	0.920
AKU10851.1	AKU10848.1	AzCIB_0946	AzCIB_0943	Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.	Putative negative regulator of flagellin synthesis.	0.925
AKU10851.1	AKU10860.1	AzCIB_0946	AzCIB_0955	Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.	Flagellar hook-filament junction protein 3.	0.981
AKU10851.1	AKU10866.1	AzCIB_0946	AzCIB_0961	Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.	Flagellar motor switch protein.	0.996
AKU10851.1	AKU10871.1	AzCIB_0946	AzCIB_0966	Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.	Flagellar-specific ATP synthase.	0.977
AKU10851.1	AKU10874.1	AzCIB_0946	AzCIB_0969	Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.	Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.	0.996
AKU10851.1	AKU10882.1	AzCIB_0946	AzCIB_0977	Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.	Flagellar protein FliS.	0.975
AKU10851.1	AKU10883.1	AzCIB_0946	AzCIB_0978	Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.	Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.	0.977
AKU10851.1	AKU10885.1	AzCIB_0946	AzCIB_0980	Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.	Flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.970
AKU10851.1	flgK	AzCIB_0946	AzCIB_0954	Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.	Flagellar hook-filament junction protein 1.	0.988
AKU10860.1	AKU10848.1	AzCIB_0955	AzCIB_0943	Flagellar hook-filament junction protein 3.	Putative negative regulator of flagellin synthesis.	0.894