Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU10886.1Diguanylate cyclase. (606 aa)    
Predicted Functional Partners:
AKU13615.1
Hypothetical protein.
 
 
 0.838
AKU12489.1
Response regulator receiver.
 
 
 0.814
AKU11478.1
Response regulator.
 
 
 0.808
AKU10672.1
Diguanylate cyclase/phosphodiesterase.
 
  
 0.781
AKU12240.1
Complex sensory protein.
 
 
0.745
AKU14140.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
 
 0.743
AKU13219.1
Hypothetical protein.
 
 
 0.739
AKU10880.1
Hypothetical protein.
 
    0.702
AKU10885.1
Flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.698
AKU12063.1
Two-component system sensor-response regulator hybrid protein.
 
 
 0.656
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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