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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10895.1Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (611 aa)    
Predicted Functional Partners:
AKU10896.1
Indolepyruvate oxidoreductase subunit beta.
 
 
 0.977
AKU12780.1
Pyruvate oxidoreductase.
 
 
 0.757
AKU12588.1
phenylacetate-CoA ligase.
 
    0.588
AKU12730.1
Anaerobic phenylacetate CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
    0.587
AKU12749.1
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
 
 
 0.577
AKU10242.1
Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
    0.572
AKU12017.1
phenylacetate--CoA ligase.
 
    0.568
AKU11160.1
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
 
 
0.519
korA2
Putative 2-oxoglutarate:ferredoxin oxidoreductase alfa subunit.
  
 
 0.491
AKU10894.1
Methyl-accepting chemotaxis sensory transducer with Cache sensor.
  
    0.488
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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