Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10908.1Hypothetical protein. (542 aa)    
Predicted Functional Partners:
AKU10454.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.544
AKU10909.1
Extracellular ligand-binding receptor.
       0.495
AKU10056.1
Type I secretion membrane fusion protein, HlyD family.
  
 0.415
AKU12610.1
Type I secretion protein.
  
 0.415
AKU12743.1
Multidrug resistance transmembrane protein.
  
 0.415
AKU13806.1
HlyD family secretion protein.
  
 0.415
AKU14324.1
Secretion protein HlyD family protein.
  
 0.415
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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