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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10929.1Peptidoglycan-binding protein. (316 aa)    
Predicted Functional Partners:
AKU14560.1
Hypothetical protein.
  
 
 
 0.689
AKU11227.1
Hypothetical protein.
 
   
 0.599
AKU10930.1
Hypothetical protein.
       0.598
AKU10081.1
SurA-like protein.
  
     0.578
AKU12601.1
Hypothetical protein.
  
  
 0.555
AKU14547.1
Hypothetical protein.
  
     0.555
AKU10410.1
Lipopolysaccharide core biosynthesis protein.
  
     0.534
AKU14559.1
Hypothetical protein.
  
     0.522
AKU12041.1
Hypothetical protein.
  
   
 0.519
AKU14215.1
Hypothetical protein.
  
     0.511
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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