STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10932.1Putative TonB-dependent receptor. (674 aa)    
Predicted Functional Partners:
AKU13829.1
Hypothetical protein.
 
 
 0.847
AKU12979.1
C-terminal TonB domain conaining protein.
  
 
 0.822
AKU13769.1
Putative TonB family protein.
  
 
 0.822
AKU13278.1
Hypothetical protein.
    
 
 0.724
AKU12134.1
Putative lipoprotein.
 
  
 0.585
AKU10722.1
Putative polysaccharide export protein.
  
  
 0.562
AKU13589.1
Polysaccharide export protein.
  
  
 0.553
AKU11742.1
Polysaccharide export protein EpsE.
  
  
 0.543
AKU10688.1
Hypothetical protein.
  
  
 0.539
AKU13516.1
Outer membrane protein.
 
  
 0.521
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.