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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10936.1Regulatory helix-turn-helix protein; LysR family protein 204; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
AKU10935.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.783
AKU11120.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.742
AKU11068.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.710
AKU13071.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.705
AKU13186.1
LysR family transcriptional regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.682
AKU11026.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.662
gcdR
GcdR; Belongs to the LysR transcriptional regulatory family.
  
     0.643
AKU11921.1
Transcriptional regulator, AraC family; Belongs to the LysR transcriptional regulatory family.
  
     0.634
AKU14481.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.536
AKU10937.1
cyclohexanecarboxylate-CoA ligase.
       0.517
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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