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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10950.1Two-component system, NarL family, invasion response regulator. (215 aa)    
Predicted Functional Partners:
AKU10951.1
Two-component system, NarL family, sensor histidine kinase.
 
 
 0.967
AKU13320.1
Transcriptional regulator, LuxR family.
  
  
 
0.911
AKU12151.1
Putative sensory box histidine kinase.
 
 
 0.901
AKU12570.1
Sensor histidine kinase.
 
 
 0.862
AKU13322.1
Sensor histidine kinase.
 
 0.859
AKU13969.1
Putative PAS/PAC sensor histidine kinase.
 
 
 0.858
AKU11562.1
Signal transduction histidine kinase, glucose-6-phosphate specific.
 
 
 0.857
AKU10953.1
Hypothetical protein.
       0.785
AKU10952.1
Zn-dependent hydrolase.
     
 0.783
AKU13995.1
Hypothetical protein.
  
     0.764
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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