Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU10952.1Zn-dependent hydrolase. (329 aa)    
Predicted Functional Partners:
AKU10953.1
Hypothetical protein.
 
   
 0.950
AKU10954.1
Quinoprotein ethanol dehydrogenase.
 
   
 0.835
AKU10995.1
Cytochrome c, class I.
 
   
 0.784
AKU10950.1
Two-component system, NarL family, invasion response regulator.
     
 0.781
AKU10951.1
Two-component system, NarL family, sensor histidine kinase.
       0.779
AKU10994.1
Extracellular solute-binding protein family 3.
 
     0.734
AKU10991.1
40-residue YVTN family beta-propeller repeat protein.
 
     0.703
AKU10992.1
Hypothetical protein.
 
     0.683
AKU13756.1
Putative quinoprotein ethanol dehydrogenase.
 
   
 0.630
AKU10993.1
ABC-2 type transporter permase, antibiotic transport system permease protein.
 
     0.618
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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