Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU10965.1Hypothetical protein. (371 aa)    
Predicted Functional Partners:
AKU10966.1
Hypothetical protein.
     0.990
AKU12495.1
N-6 DNA methylase.
 
    0.578
AKU10531.1
Type I restriction enzyme EcoEI M protein.
 
    0.552
AKU12496.1
Type I restriction modification DNA specificity domain protein.
 
  
 0.537
AKU14276.1
Restriction endonuclease S subunit.
 
  
 0.518
AKU14270.1
N-6 DNA methylase.
 
    0.514
AKU10530.1
Type I restriction enzyme EcoEI R protein.
  
    0.505
AKU14616.1
Adenine-specific DNA-methyltransferase.
 
    0.474
AKU12494.1
Type I site-specific deoxyribonuclease.
 
  
 0.407
AKU10967.1
Filamentation induced by cAMP protein Fic.
       0.405
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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