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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10970.1Lysine 2,3-aminomutase. (393 aa)    
Predicted Functional Partners:
AKU10973.1
D-lysine 5,6-aminomutase, alpha subunit.
 
  
 0.978
AKU10974.1
L-beta-lysine 5,6-aminomutase, beta subunit.
 
  
 0.975
AKU10971.1
Zinc-binding alcohol dehydrogenase.
 
     0.900
AKU10972.1
Hypothetical protein.
 
     0.882
AKU13551.1
Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
     
 0.807
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.807
AKU10975.1
Hypothetical protein.
 
   
 0.696
AKU12153.1
MCP methyltransferase/methylesterase, CheR/CheB.
   
   0.634
AKU12184.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
   
   0.634
AKU12239.1
Chemotaxis protein CheR.
    
   0.624
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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