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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU10974.1L-beta-lysine 5,6-aminomutase, beta subunit. (250 aa)    
Predicted Functional Partners:
AKU10973.1
D-lysine 5,6-aminomutase, alpha subunit.
 
 0.999
AKU10971.1
Zinc-binding alcohol dehydrogenase.
 
 
 0.989
AKU10970.1
Lysine 2,3-aminomutase.
 
  
 0.975
AKU10015.1
Aminotransferase class-IV.
     
 0.903
AKU10976.1
Hypothetical protein.
 
   
 0.889
AKU10975.1
Hypothetical protein.
 
   
 0.887
AKU10972.1
Hypothetical protein.
 
     0.880
AKU14212.1
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.602
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
  
  
 0.444
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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