STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11003.1Hypothetical protein; Belongs to the ABC transporter superfamily. (237 aa)    
Predicted Functional Partners:
AKU11002.1
Hypothetical protein.
  
  0.981
AKU10302.1
Molybdate or tungstate transport.
 
 
  0.908
AKU09975.1
Glutamate/aspartate ABC transporter transmembrane protein.
  
 0.814
AKU09976.1
Glutamate/aspartate ABC transporter transmembrane protein.
  
 0.814
AKU13285.1
Glutamate/aspartate transport protein; ABC superfamily, membrane component.
  
 0.814
AKU13286.1
Glutamate/aspartate transport protein; ABC superfamily, membrane component.
  
 0.814
AKU12932.1
Hypothetical protein.
  
  
 0.694
AKU10960.1
Polar amino acid ABC transporter; HisM; inner membrane subunit, histidine transport system permease protein.
  
 
 0.681
AKU11725.1
Oligopeptide-binding protein oppA precursor.
   
 
 0.681
AKU12037.1
Spermidine/putrescine transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.671
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.