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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11007.1Hypothetical protein; Belongs to the UPF0312 family. (197 aa)    
Predicted Functional Partners:
AKU11006.1
Cytochrome b561.
  
 0.981
AKU11008.1
Hypothetical protein; Belongs to the UPF0312 family.
 
     0.913
AKU11974.1
Hypothetical protein; Belongs to the UPF0312 family.
 
     0.781
AKU11005.1
Nucleoside-diphosphate-sugar epimerase.
  
    0.635
gpmA
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
    0.465
AKU13798.1
Cytochrome c-552 precursor protein.
  
     0.454
AKU11009.1
Iron sulfur domain-containing, CDGSH-type.
       0.443
AKU11004.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.423
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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