Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU11027.1Iron complex transport system substrate-binding protein. (267 aa)    
Predicted Functional Partners:
AKU10426.1
Iron complex transport system ATP-binding protein.
 
 0.866
AKU10425.1
Transmembrane ABC transporter protein,permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.853
AKU13811.1
ABC transporter, permease protein.
    
 0.678
AKU13810.1
ABC transporter related protein.
    
 0.673
AKU11725.1
Oligopeptide-binding protein oppA precursor.
    
 0.661
AKU14153.1
ATP-binding ABC transporter protein.
     
  0.626
AKU11021.1
Hypothetical protein.
     
  0.615
AKU11022.1
Lipopolysaccharide export system, permease YjgP/YjgQ family protein.
     
  0.615
AKU11776.1
Transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
    
 0.560
AKU12037.1
Spermidine/putrescine transport ATP-binding protein; Belongs to the ABC transporter superfamily.
    
 0.560
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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