Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU11029.1ArsR family transcriptional regulator. (123 aa)    
Predicted Functional Partners:
AKU11030.1
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 0.984
AKU11033.1
arsB, putative arsenical-resistance protein.
 
  
 0.867
AKU11032.1
Arsenical pump-driving ATPase; Anion-transporting ATPase; Belongs to the arsA ATPase family.
 
   
 0.744
AKU11031.1
Arsenate resistance operon, repressor ArsD.
 
   
 0.738
AKU11028.1
Pseudouridine synthase A.
       0.563
AKU10810.1
Hypothetical protein.
  
  
 0.409
AKU14246.1
Mg(2+) chelatase family protein.
  
    0.402
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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