STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11041.1Hypothetical protein. (1571 aa)    
Predicted Functional Partners:
AKU10648.1
Putative serine/threonine protein kinase.
  
 
 0.862
AKU11770.1
Hypothetical protein.
   
 
 0.662
AKU14170.1
Hypothetical protein.
   
 
 0.662
AKU12611.1
Hypothetical protein.
   
 
 0.646
AKU13642.1
FHA domain-containing protein.
   
 
 0.646
AKU12606.1
Putative phosphoprotein phosphatase.
  
 
 0.559
AKU13226.1
Putative phosphoprotein phosphatase.
  
 
 0.559
AKU13643.1
Phosphoprotein phosphatase.
  
 
 0.559
AKU14281.1
Putative phosphoprotein phosphatase.
  
 
 0.559
rsgA
Ribosome-associated GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
  
  
 0.523
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
Server load: medium (58%) [HD]