STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11054.1Periplasmic binding protein. (287 aa)    
Predicted Functional Partners:
AKU11055.1
Sensor histidine kinase protein.
 
    0.860
AKU11050.1
Hypothetical protein.
 
   
 0.787
AKU11056.1
Fis family transcriptional regulator.
  
  
 0.777
AKU11053.1
Hypothetical protein.
 
     0.776
AKU12932.1
Hypothetical protein.
  
  
 0.735
AKU10230.1
Periplasmic binding protein/LacI transcriptional regulator.
  
 
  0.726
AKU14566.1
Hypothetical protein.
  
  
  0.708
AKU11052.1
Anaerobic arsenite oxidase ArxA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.688
AKU11725.1
Oligopeptide-binding protein oppA precursor.
  
 
 0.680
AKU10959.1
Polar amino acid ABC transporter; HisQ; inner membrane subunit, histidine transport system permease protein.
    
  0.674
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.