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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11056.1Fis family transcriptional regulator. (444 aa)    
Predicted Functional Partners:
AKU12551.1
Histidine kinase.
 
 0.934
AKU10067.1
Signal transduction histidine kinase.
 
 0.927
AKU12576.1
Transcriptional regulator, Fis family.
  
  
 
0.919
AKU13294.1
Fis family transcriptional regulator.
  
  
 
0.916
AKU11055.1
Sensor histidine kinase protein.
 
 
 0.878
AKU14154.1
RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.786
AKU11054.1
Periplasmic binding protein.
  
  
 0.777
AKU11029.1
ArsR family transcriptional regulator.
      
 0.656
AKU11033.1
arsB, putative arsenical-resistance protein.
      
 0.656
AKU11048.1
Phage-related integrase.
      
 0.646
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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