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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11092.1Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (419 aa)    
Predicted Functional Partners:
AKU11093.1
Hydrophobe/amphiphile efflux-1 family protein.
 0.967
AKU11094.1
RND efflux system, outer membrane lipoprotein, NodT family.
 
 0.950
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 0.946
AKU12775.1
Multidrug efflux system protein.
 0.892
AKU13834.1
Hypothetical protein.
 
 0.845
AKU12612.1
RND efflux system, outer membrane lipoprotein, NodT family.
 
 0.821
AKU12774.1
RND efflux system, outer membrane lipoprotein, NodT family.
 
 0.817
AKU13400.1
Cation/multidrug efflux pump protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.787
AKU12742.1
Outer membrane multidrug resistance lipoprotein.
 
 0.775
AKU13742.1
Efflux transporter, RND family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.697
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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