rnfD protein (Azoarcus sp. CIB) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

rnfD

Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. (363 aa)

Predicted Functional Partners:

rnfC-2

0.993

rnfG-2

0.993

rnfE-2

0.993

rnfA-2

0.986

rnfE

0.974

rnfE-3

0.974

rnfC-3

0.973

rnfG

0.972

rnfB-2

0.972

rnfG-3

0.968

Your Current Organism:

Azoarcus sp. CIB

NCBI taxonomy Id: 198107
Other names: A. sp. CIB

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rnfA-2	rnfB-2	AzCIB_1203	AzCIB_1204	Electron transport subunit of NADH:ferredoxin oxidoreductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	0.978
rnfA-2	rnfC-2	AzCIB_1203	AzCIB_1205	Electron transport subunit of NADH:ferredoxin oxidoreductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.	0.976
rnfA-2	rnfC-3	AzCIB_1203	AzCIB_1887	Electron transport subunit of NADH:ferredoxin oxidoreductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	Electron transport complex protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.	0.918
rnfA-2	rnfD	AzCIB_1203	AzCIB_1206	Electron transport subunit of NADH:ferredoxin oxidoreductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	0.986
rnfA-2	rnfE	AzCIB_1203	AzCIB_0677	Electron transport subunit of NADH:ferredoxin oxidoreductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	Electron transport complex RsxE subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	0.804
rnfA-2	rnfE-2	AzCIB_1203	AzCIB_1208	Electron transport subunit of NADH:ferredoxin oxidoreductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	Electron transport complex protein RsxE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	0.940
rnfA-2	rnfE-3	AzCIB_1203	AzCIB_1890	Electron transport subunit of NADH:ferredoxin oxidoreductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	Electron transport complex protein RsxE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	0.794
rnfA-2	rnfG	AzCIB_1203	AzCIB_0678	Electron transport subunit of NADH:ferredoxin oxidoreductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.	0.902
rnfA-2	rnfG-2	AzCIB_1203	AzCIB_1207	Electron transport subunit of NADH:ferredoxin oxidoreductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.	0.972
rnfA-2	rnfG-3	AzCIB_1203	AzCIB_1889	Electron transport subunit of NADH:ferredoxin oxidoreductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	Electron transport complex protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.	0.880
rnfB-2	rnfA-2	AzCIB_1204	AzCIB_1203	Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	Electron transport subunit of NADH:ferredoxin oxidoreductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	0.978
rnfB-2	rnfC-2	AzCIB_1204	AzCIB_1205	Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.	0.979
rnfB-2	rnfC-3	AzCIB_1204	AzCIB_1887	Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	Electron transport complex protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.	0.922
rnfB-2	rnfD	AzCIB_1204	AzCIB_1206	Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.	0.972
rnfB-2	rnfE	AzCIB_1204	AzCIB_0677	Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	Electron transport complex RsxE subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	0.900
rnfB-2	rnfE-2	AzCIB_1204	AzCIB_1208	Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	Electron transport complex protein RsxE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	0.972
rnfB-2	rnfE-3	AzCIB_1204	AzCIB_1890	Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	Electron transport complex protein RsxE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.	0.891
rnfB-2	rnfG	AzCIB_1204	AzCIB_0678	Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.	0.913
rnfB-2	rnfG-2	AzCIB_1204	AzCIB_1207	Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.	0.977
rnfB-2	rnfG-3	AzCIB_1204	AzCIB_1889	Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.	Electron transport complex protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.	0.892

page 1 of 5

Server load: low (18%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Textmining

Co-expression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About