Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU11124.1Hypothetical protein. (309 aa)    
Predicted Functional Partners:
AKU11123.1
Hypothetical protein.
 
    0.969
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
  
 0.663
AKU11125.1
Membrane protein.
       0.651
AKU10226.1
Hypothetical protein.
    
 0.627
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.624
AKU10409.1
Lipopolysaccharide core biosynthesis protein.
  
 
 0.619
AKU12991.1
Metallo-beta-lactamase superfamily protein.
 
 
 0.590
AKU10038.1
ATP-dependent DNA helicase, RecQ family.
   
 0.583
AKU09973.1
Hypothetical protein.
  
 0.563
AKU13297.1
Hypothetical protein.
  
 0.558
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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