Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU11129.1Hypothetical protein. (67 aa)    
Predicted Functional Partners:
AKU13385.1
Hypothetical protein.
  
     0.538
AKU11135.1
Hydrolase or acyltransferase-like protein.
 
     0.537
AKU13445.1
Hypothetical protein.
  
     0.511
AKU14128.1
Hypothetical protein.
  
     0.502
AKU13967.1
Cytochrome c, class I.
  
     0.461
AKU11922.1
Major facilitator superfamily MFS_1.
  
     0.455
AKU11011.1
Cytochrome c class I.
  
     0.437
AKU12173.1
Beta-(1,2)-glucan production associated transmembrane protein.
  
     0.412
AKU11443.1
Hypothetical protein.
  
     0.410
AKU13338.1
Helix-turn-helix protein, CopG protein.
  
     0.408
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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