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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11134.1Carboxypeptidase. (338 aa)    
Predicted Functional Partners:
AKU11135.1
Hydrolase or acyltransferase-like protein.
 
 
   0.956
AKU11133.1
Hypothetical protein.
       0.757
AKU11132.1
Hypothetical protein.
       0.561
AKU09971.1
Hypothetical protein.
    
 0.470
AKU13750.1
Pyruvate dehydrogenase E2 component.
   
  0.439
AKU11129.1
Hypothetical protein.
 
     0.406
AKU11264.1
Hypothetical protein.
    
 0.406
AKU13709.1
Hypothetical protein.
 
     0.405
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
 
 0.401
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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