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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11143.1Gentisate 1,2-dioxygenase. (346 aa)    
Predicted Functional Partners:
AKU11146.1
Maleylpyruvate isomerase.
 
  
 0.974
AKU11145.1
Salicylate hydroxylase.
 
  
 0.913
AKU11144.1
Fumarylpyruvate hydrolase.
 
   
 0.775
AKU11142.1
Putative LysR-type transcriptional regulator NahR; Belongs to the LysR transcriptional regulatory family.
 
     0.675
AKU12625.1
feruloyl-CoA synthase.
  
     0.575
AKU11147.1
Amino acid ABC transporter, periplasmic amino-acid binding protein.
 
     0.573
AKU12413.1
Hypothetical protein.
 
  
 0.538
boxC
Benzoyl-CoA-dihydrodiol lyase.
  
     0.521
boxB
Benzoyl-CoA oxygenase component B.
  
     0.518
AKU11518.1
Putative ABC transporter subunit.
  
     0.515
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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