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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11153.1Arylsulfatase. (544 aa)    
Predicted Functional Partners:
AKU11154.1
TPR repeat-containing protein.
 
 
  0.739
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
   
 
  0.670
AKU13565.1
Sulfatase.
 
   
 0.631
AKU11362.1
3-beta-hydroxysteroid dehydrogenase.
   
 0.621
AKU11377.1
Hypothetical protein.
   
 0.621
AKU11378.1
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.621
AKU11407.1
Short-chain dehydrogenase/reductase SDR.
   
 0.621
bzdZ
BzdZ.
   
 0.621
AKU11808.1
3-ketoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.621
AKU11839.1
Putative 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase.
   
 0.621
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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