AKU11164.1 protein (Azoarcus sp. CIB) - STRING interaction network

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Score

AKU11164.1

ATP-independent RNA helicase; Belongs to the DEAD box helicase family. (492 aa)

Predicted Functional Partners:

AKU11471.1

0.859

rplD

0.837

pnp

0.822

rplJ

0.816

nnrE

0.790

rplC

0.781

rpsC

0.779

AKU11163.1

0.776

rlmE

0.767

rplM

0.755

Your Current Organism:

Azoarcus sp. CIB

NCBI taxonomy Id: 198107
Other names: A. sp. CIB

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKU11163.1	AKU11164.1	AzCIB_1258	AzCIB_1259	Hypothetical protein.	ATP-independent RNA helicase; Belongs to the DEAD box helicase family.	0.776
AKU11164.1	AKU11163.1	AzCIB_1259	AzCIB_1258	ATP-independent RNA helicase; Belongs to the DEAD box helicase family.	Hypothetical protein.	0.776
AKU11164.1	AKU11471.1	AzCIB_1259	AzCIB_1570	ATP-independent RNA helicase; Belongs to the DEAD box helicase family.	GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	0.859
AKU11164.1	nnrE	AzCIB_1259	AzCIB_2896	ATP-independent RNA helicase; Belongs to the DEAD box helicase family.	Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...]	0.790
AKU11164.1	pnp	AzCIB_1259	AzCIB_2618	ATP-independent RNA helicase; Belongs to the DEAD box helicase family.	Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.822
AKU11164.1	rlmE	AzCIB_1259	AzCIB_3006	ATP-independent RNA helicase; Belongs to the DEAD box helicase family.	Cell division protein; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	0.767
AKU11164.1	rplC	AzCIB_1259	AzCIB_4039	ATP-independent RNA helicase; Belongs to the DEAD box helicase family.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.781
AKU11164.1	rplD	AzCIB_1259	AzCIB_4038	ATP-independent RNA helicase; Belongs to the DEAD box helicase family.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.837
AKU11164.1	rplJ	AzCIB_1259	AzCIB_4048	ATP-independent RNA helicase; Belongs to the DEAD box helicase family.	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.816
AKU11164.1	rplM	AzCIB_1259	AzCIB_0932	ATP-independent RNA helicase; Belongs to the DEAD box helicase family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.755
AKU11164.1	rpsC	AzCIB_1259	AzCIB_4033	ATP-independent RNA helicase; Belongs to the DEAD box helicase family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.779
AKU11471.1	AKU11164.1	AzCIB_1570	AzCIB_1259	GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	ATP-independent RNA helicase; Belongs to the DEAD box helicase family.	0.859
AKU11471.1	pnp	AzCIB_1570	AzCIB_2618	GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.498
AKU11471.1	rlmE	AzCIB_1570	AzCIB_3006	GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	Cell division protein; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	0.962
AKU11471.1	rplC	AzCIB_1570	AzCIB_4039	GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.830
AKU11471.1	rplD	AzCIB_1570	AzCIB_4038	GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.803
AKU11471.1	rplJ	AzCIB_1570	AzCIB_4048	GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.966
AKU11471.1	rplM	AzCIB_1570	AzCIB_0932	GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.805
nnrE	AKU11164.1	AzCIB_2896	AzCIB_1259	Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...]	ATP-independent RNA helicase; Belongs to the DEAD box helicase family.	0.790
nnrE	pnp	AzCIB_2896	AzCIB_2618	Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...]	Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.413