Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU11196.1Hypothetical protein. (932 aa)    
Predicted Functional Partners:
AKU11195.1
Hypothetical protein.
     
 0.809
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.648
AKU11337.1
ATPase-like protein.
  
     0.647
AKU11341.1
Hypothetical protein.
  
   0.634
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
 
 
 0.621
AKU10233.1
Hypothetical protein.
  
     0.455
AKU13391.1
Hypothetical protein.
  
 
 0.430
AKU13880.1
Hypothetical protein.
  
     0.420
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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