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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11234.1DNA polymerase III, epsilon subunit. (722 aa)    
Predicted Functional Partners:
AKU11232.1
Fusion Na-dependent permease/histidine kinase domain-containing protein.
 
 
 0.931
AKU11233.1
Response regulator receiver protein.
 
 
 0.907
AKU11231.1
Hypothetical protein.
       0.732
AKU11235.1
solute:Na+ symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.722
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.637
AKU11477.1
Sensory transduction histidine kinase.
  
 
 0.634
AKU12063.1
Two-component system sensor-response regulator hybrid protein.
  
 
 0.634
AKU10031.1
PAS domain S-box.
  
 
 0.612
AKU10597.1
Putative hybrid sensor and regulator.
  
 
 0.612
AKU11211.1
Hypothetical protein.
  
 
 0.612
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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