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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11235.1solute:Na+ symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (685 aa)    
Predicted Functional Partners:
AKU12799.1
Nucleotidyltransferase.
 
  
 0.876
AKU13164.1
Hypothetical protein.
 
    0.822
AKU11234.1
DNA polymerase III, epsilon subunit.
 
     0.722
AKU10682.1
Hypothetical protein.
 
  
 0.688
AKU14014.1
Hypothetical protein.
  
  
 0.645
AKU11232.1
Fusion Na-dependent permease/histidine kinase domain-containing protein.
  
  
 0.597
AKU11233.1
Response regulator receiver protein.
       0.591
AKU12800.1
DNA polymerase III, epsilon subunit.
 
    0.580
acsA
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.578
AKU11231.1
Hypothetical protein.
       0.535
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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