Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU11238.1Hypothetical protein. (719 aa)    
Predicted Functional Partners:
AKU11240.1
Hypothetical protein.
       0.778
AKU11239.1
Hypothetical protein.
       0.773
AKU11241.1
Hypothetical protein.
       0.773
AKU11242.1
Hypothetical protein.
       0.773
AKU12240.1
Complex sensory protein.
  
    0.556
AKU11246.1
Hypothetical protein.
       0.476
AKU11243.1
Hypothetical protein.
       0.465
AKU11244.1
Hypothetical protein.
       0.465
AKU11245.1
Helicase domain protein.
       0.465
AKU11247.1
Hypothetical protein.
       0.444
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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