Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU11250.1DNA protecting protein DprA. (467 aa)    
Predicted Functional Partners:
AKU11251.1
ATP-dependent DNA helicase RecQ.
   
 0.943
AKU12240.1
Complex sensory protein.
  
    0.781
AKU11252.1
Hypothetical protein.
       0.778
AKU11896.1
DNA internalization-related competence protein.
  
  
 0.695
AKU10775.1
Hypothetical protein.
 
 
 0.653
AKU13534.1
Type IV fimbrial biogenesis protein, prepilin cysteine protease; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
  
 0.639
AKU13998.1
Flp pilus assembly protein, protease CpaA.
  
  
 0.636
AKU14246.1
Mg(2+) chelatase family protein.
 
 
 0.535
AKU10730.1
Glycosyltransferase family protein.
 
    0.518
AKU10031.1
PAS domain S-box.
 
  
 0.486
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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