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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11250.1DNA protecting protein DprA. (467 aa)    
Predicted Functional Partners:
AKU11251.1
ATP-dependent DNA helicase RecQ.
  
 0.945
AKU12240.1
Complex sensory protein.
  
  
 0.799
AKU11252.1
Hypothetical protein.
       0.779
AKU11896.1
DNA internalization-related competence protein.
  
  
 0.717
AKU10775.1
Hypothetical protein.
 
 
 0.683
AKU10730.1
Glycosyltransferase family protein.
 
    0.616
AKU13534.1
Type IV fimbrial biogenesis protein, prepilin cysteine protease; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
  
 0.584
AKU13998.1
Flp pilus assembly protein, protease CpaA.
  
  
 0.577
AKU14246.1
Mg(2+) chelatase family protein.
 
 
 0.542
fliP
Flagellar biosynthesis protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
    0.525
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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