Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU11257.1ATPase. (463 aa)    
Predicted Functional Partners:
AKU11255.1
Hypothetical protein.
       0.777
AKU11256.1
Hypothetical protein.
       0.773
AKU11258.1
Hypothetical protein.
       0.773
AKU11254.1
Methionine adenosyltransferase.
     
 0.752
AKU11218.1
Nitric oxide reductase activation protein.
  
 
 0.557
AKU14395.1
BssF.
  
 
 0.557
AKU11260.1
Von Willebrand factor type A.
 
    0.469
AKU11253.1
Hypothetical protein.
  
    0.450
AKU11259.1
ADP-ribosylglycohydrolase.
       0.450
AKU13473.1
ATPase associated with various cellular activities AAA_3.
  
     0.421
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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