Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU11285.1Putative dual specificity protein phosphatase. (198 aa)    
Predicted Functional Partners:
AKU11264.1
Hypothetical protein.
   
 0.871
AKU10614.1
ADP-ribosyl-[dinitrogen reductase] hydrolase.
      0.836
AKU10226.1
Hypothetical protein.
    
 
 0.713
AKU13786.1
Dihydroorotase.
     
 0.603
AKU10404.1
Lipopolysaccharide kinase (Kdo/WaaP) family.
   
 0.591
AKU10409.1
Lipopolysaccharide core biosynthesis protein.
   
 0.591
AKU09973.1
Hypothetical protein.
  
 0.587
AKU13297.1
Hypothetical protein.
  
 0.587
AKU10938.1
Hypothetical protein.
  
 0.586
AKU11193.1
CBS domain containing protein.
  
 0.586
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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