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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11356.1Putative 4-coumarate--CoA ligase-like 6-like. (566 aa)    
Predicted Functional Partners:
AKU12394.1
AMP-dependent synthetase and ligase.
 
 
0.714
AKU11392.1
Putative O-succinylbenzoate--CoA ligase.
  
  
 
0.704
AKU12943.1
acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase).
  
  
 
0.701
AKU12873.1
Hydrogen dehydrogenase, alpha subunit.
    
 
 0.640
AKU14480.1
Formate dehydrogenase, NAD(P) reducing, beta subunit.
    
 
 0.640
AKU13963.1
Long-chain acyl-CoA synthetase.
  
 
0.629
AKU13917.1
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.
    
 0.582
AKU11357.1
Beta-lactamase.
 
   
 0.550
AKU12429.1
Cytochrome P450.
  
 0.545
AKU12439.1
Hypothetical protein; Belongs to the cytochrome P450 family.
  
 0.545
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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